- Class: 3
- Architecture: 3.40:3-Layer(aba) Sandwich
- Topology: 3.40.50:Rossmann fold
- Homology: 3.40.50.9100:Dehydroquinase, class II
PDB Entries
PDB ID | OPM | Mutant | Chain Formula | Resolution | HETNAM | |||
---|---|---|---|---|---|---|---|---|
Amino Acid sequence | SCOPe Family Level | CATH Homology Level | ||||||
1d0i | [A12] | [A12] | [A12] | 1.8 | PO4:PHOSPHATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
1gqo | [A12] | [A12] | [A12] | 2.1 | GOL:GLYCEROL | |||
1gtz | [A12] | [A12] | [A12] | 1.6 | DHK:3-DEHYDROSHIKIMATE TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
1gu0 | [A12] | [A12] | [A12] | 2 | TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
1gu1 | [A12] | [A12] | [A12] | 1.8 | FA1:2,3 -ANHYDRO-QUINIC ACID GOL:GLYCEROL TLA:L(+)-TARTARIC ACID TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
1h05 | [A12] | [A12] | [A12] | 1.5 | SO4:SULFATE ION | |||
1h0r | [A12] | [A12] | [A12] | 2.1 | CL:CHLORIDE ION FA1:2,3 -ANHYDRO-QUINIC ACID GOL:GLYCEROL PO4:PHOSPHATE ION | |||
1h0s | [A12] | [A12] | [A12] | 1.7 | FA6:3-HYDROXYIMINO QUINIC ACID GOL:GLYCEROL SO4:SULFATE ION | |||
1j2y | [A12] | [A12] | [A12] | 2.6 | DQA:1,3,4-TRIHYDROXY-5-OXO-CYCLOHEXANECARBOXYLIC ACID | |||
1uqr | [A12] | [A12] | [A12] | 1.7 | SO4:SULFATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
1v1j | [A12] | [A12] | [A12] | 2.2 | FA3:2-ANHYDRO-3-FLUORO-QUINIC ACID TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
2bt4 | [A12] | [A12] | [A12] | 1.7 | CA2:(1S,3R,4R,5S)-1,3,4-TRIHYDROXY-5-(3-PHENOXYPROPYL)CYCLOHEXANECARBOXYLIC ACID GOL:GLYCEROL PO4:PHOSPHATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
2c4v | [A2] | [A2] | [A2] | 2.5 | CIT:CITRIC ACID | |||
2c4w | [A2] | [A2] | [A2] | 1.55 | GAJ:N-TETRAZOL-5-YL 9-OXO-9H-XANTHENE-2SULPHONAMIDE GOL:GLYCEROL IMD:IMIDAZOLE | |||
2c57 | [A12] | [A12] | [A12] | 3.1 | FA1:2,3 -ANHYDRO-QUINIC ACID | |||
2cjf | [A12] | [A12] | [A12] | 1.95 | GOL:GLYCEROL PO4:PHOSPHATE ION RP4:(1S,4S,5S)-1,4,5-TRIHYDROXY-3-[3-(PHENYLTHIO)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC ACID TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
2dhq | [A10] | [A10] | [A10] | 2 | ||||
2uyg | [A12] | [A12] | [A12] | 2.2 | GOL:GLYCEROL | |||
2wks | [A12] | [A12] | [A12] | 2.95 | CB6:(1R,4S,5R)-1,4,5-TRIHYDROXY-3-[(5-METHYL-1-BENZOTHIOPHEN-2-YL)METHOXY]CYCLOHEX-2-ENE-1-CARBOXYLICACID | |||
2xb8 | [A12] | [A12] | [A12] | 2.4 | SO4:SULFATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL XNW:(1R,2R,4S,5R)-1,4,5-TRIHYDROXY-2-(4-METHOXYBENZYL)-3-OXOCYCLOHEXANECARBOXYLIC ACID | |||
2xb9 | [A12] | [A12] | [A12] | 2.75 | CIT:CITRIC ACID XNW:(1R,2R,4S,5R)-1,4,5-TRIHYDROXY-2-(4-METHOXYBENZYL)-3-OXOCYCLOHEXANECARBOXYLIC ACID | |||
2xd9 | [A12] | [A12] | [A12] | 1.95 | XD9:(4R,6R,7S)-4,6,7-TRIHYDROXY-2-[(1E)-PROP-1-EN-1-YL]-4,5,6,7-TETRAHYDRO-1-BENZOTHIOPHENE-4-CARBOXYLIC ACID | |||
2xda | [A12] | [A12] | [A12] | 1.85 | JPS:(4R,6R,7S)-2-(2-CYCLOPROPYLETHYL)-4,6,7-TRIHYDROXY-4,5,6,7-TETRAHYDRO-1-BENZOTHIOPHENE-4-CARBOXYLIC ACID | |||
2y71 | [A3] | [A3] | [A3] | 1.5 | CB6:(1R,4S,5R)-1,4,5-TRIHYDROXY-3-[(5-METHYL-1-BENZOTHIOPHEN-2-YL)METHOXY]CYCLOHEX-2-ENE-1-CARBOXYLICACID NA:SODIUM ION SO4:SULFATE ION | |||
2y76 | [A3] | [A3] | [A3] | 2.5 | CB7:(1R,4S,5R)-3-(BENZO[B]THIOPHEN-5-YL)METHOXY-2-(BENZO[B]THIOPHEN-5-YL)METHYL-1,4,5-TRIHYDROXYCYCLOHEX-2-ENE-1-CARBOXYLATE SO4:SULFATE ION | |||
2y77 | [A3] | [A3] | [A3] | 1.5 | CB8:(1R,4S,5R)-3-(BENZO[B]THIOPHEN-2-YL)METHOXY-1,4,5-TRIHYDROXY-2-(THIEN-2-YL)METHYLCYCLOHEX-2-EN-1-CARBOXYLATE SO4:SULFATE ION | |||
3kip | [A12] | [A12] | [A12] | 2.95 | SO4:SULFATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
3lwz | [A12] | [A12] | [A12] | 1.65 | BME:BETA-MERCAPTOETHANOL EDO:1,2-ETHANEDIOL GOL:GLYCEROL | |||
3n59 | [A12] | [A12] | [A12] | 2.52 | 3DS:(4S,5R)-4,5-DIHYDROXY-3-OXOCYCLOHEX-1-ENE-1-CARBOXYLICACID CL:CHLORIDE ION | |||
3n76 | [A12] | [A12] | [A12] | 1.9 | CA2:(1S,3R,4R,5S)-1,3,4-TRIHYDROXY-5-(3-PHENOXYPROPYL)CYCLOHEXANECARBOXYLIC ACID | |||
3n7a | [A12] | [A12] | [A12] | 2 | FA1:2,3 -ANHYDRO-QUINIC ACID GOL:GLYCEROL | |||
3n86 | [A12] | [A12] | [A12] | 1.9 | RJP:(1R,5R)-1,5-DIHYDROXY-4-OXO-3-[3-OXO-3-(PHENYLAMINO)PROPYL]CYCLOHEX-2-ENE-1-CARBOXYLIC ACID | |||
3n87 | [A12] | [A12] | [A12] | 2.4 | N87:(1R,4R,5R)-1,4,5-TRIHYDROXY-3-[3-(PHENYLCARBONYL)PHENYL]CYCLOHEX-2-ENE-1-CARBOXYLIC ACID | |||
3n8k | [A12] | [A12] | [A12] | 2.25 | CL:CHLORIDE ION D1X:2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIDINE-4-CARBOXYLIC ACID | |||
3n8n | [A12] | [A12] | [A12] | 2.5 | N88:(1R,4R,5R)-3-(TERT-BUTYLCARBAMOYL)-1,4,5-TRIHYDROXYCYCLOHEX-2-ENE-1-CARBOXYLIC ACID | |||
3u80 | [A2] | [A2] | [A2] | 1.6 | ||||
4b6o | [A12] | [A12] | [A12] | 2 | 3DQ:(1R,2S,4S,5R)-2-(4-METHOXYPHENYL)METHYL-1,4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID SO4:SULFATE ION | |||
4b6p | [A12] | [A12] | [A12] | 2.3 | 2HN:(1R,2S,4S,5R)-2-(2,3,4,5,6-PENTAFLUOROPHENYL)METHYL-1,4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID SO4:SULFATE ION | |||
4b6q | [A12] | [A12] | [A12] | 1.54 | BZ5:(1R,2R,4S,5R)-2-(BENZO[B]THIOPHEN-5-YL)METHYL-1,4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID SO4:SULFATE ION | |||
4b6r | [A3] | [A3] | [A3] | 2 | 3DQ:(1R,2S,4S,5R)-2-(4-METHOXYPHENYL)METHYL-1,4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID SO4:SULFATE ION | |||
4b6s | [A12] | [A12] | [A12] | 1.9 | 2HN:(1R,2S,4S,5R)-2-(2,3,4,5,6-PENTAFLUOROPHENYL)METHYL-1,4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID PO4:PHOSPHATE ION | |||
4civ | [A12] | [A12] | [A12] | 2.9 | 48P:(1R,4R,5R)-1,4,5-TRIHYDROXY-3-HYDROXYMETHYLCYCLOHEX-2-ENE-1-CARBOXYLIC ACID | |||
4ciw | [A12] | [A12] | [A12] | 2.2 | NA:SODIUM ION SO4:SULFATE ION XH2:(1R,4R,5R)-1,4,5-TRIHYDROXY-3-(2-HYDROXY)ETHYLCYCLOHEX-2-ENE-1-CARBOXYLIC ACID | |||
4cix | [A12] | [A12] | [A12] | 2.9 | SO4:SULFATE ION W4N:(1R,4R,5R)-1,4,5-TRIHYDROXY-3-[(1S)-1-HYDROXY-2-PHENYL]ETHYLCYCLOHEX-2-ENE-1-CARBOXYLIC ACID | |||
4ciy | [A12] | [A12] | [A12] | 2.1 | CL:CHLORIDE ION NA:SODIUM ION NDY:(1R,4R,5R)-1,4,5-TRIHYDROXY-3-[(1R)-1-HYDROXY-2-PHENYL]ETHYLCYCLOHEX-2-ENE-1-CARBOXYLIC ACID SO4:SULFATE ION | |||
4ckw | [A] | [A] | [A] | 2.7 | GOL:GLYCEROL | |||
4ckx | [A12] | [A12] | [A12] | 2.6 | TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
4cky | [A12] | [A12] | [A12] | 1.65 | NA:SODIUM ION ND3:2,2-DIMETHYL-3-DEHYDROQUINIC ACID SO4:SULFATE ION | |||
4ckz | [A2] | [A2] | [A2] | 2.52 | ||||
4cl0 | [A12] | [A12] | [A12] | 3.1 | 9PY:(2R)-2-METHYL-3-DEHYDROQUINIC ACID | |||
4ki7 | [A12] | [A12] | [A12] | 2.8 | 1R2:3-HYDROXY-5-(3-NITROPHENOXY)BENZOIC ACID | |||
4kij | [A12] | [A12] | [A12] | 2.8 | CL:CHLORIDE ION KIJ:3,4-DIHYDROXY-5-(3-NITROPHENOXY)BENZOIC ACID | |||
4kiu | [A12] | [A12] | [A12] | 2.4 | KIU:5-[(3-NITROBENZYL)OXY]BENZENE-1,3-DICARBOXYLIC ACID | |||
4kiw | [A12] | [A12] | [A12] | 2.57 | KIW:5-[(3-NITROBENZYL)AMINO]BENZENE-1,3-DICARBOXYLIC ACID | |||
4l8l | [A] | [A] | [A] | 1.74 | ||||
4rc9 | [A12] | [A12] | [A12] | 2.05 | SO4:SULFATE ION | |||
4rhc | [A12] | [A12] | [A12] | 2.68 | ||||
4v0s | [A2] | [A2] | [A2] | 1.55 | 2HN:(1R,2S,4S,5R)-2-(2,3,4,5,6-PENTAFLUOROPHENYL)METHYL-1,4,5-TRIHYDROXY-3-OXOCYCLOHEXANE-1-CARBOXYLIC ACID 7HN:3,4-DIHYDROXY-2-[(2,3,4,5,6-PENTAFLUOROPHENYL)METHYL]BENZOIC ACID CL:CHLORIDE ION NA:SODIUM ION | |||
4zc1 | [A24] | [A24] | [A24] | 2.52 | ||||
5b6p | [A12] | [A12] | [A12] | 2 | SO4:SULFATE ION | |||
5wrf | [A12] | [A12] | [A12] | 2.51 | EDO:1,2-ETHANEDIOL | |||
5x47 | [A12] | [A12] | [A12] | 2.54 | ||||
5ydb | [A4] | [A4] | [A4] | 1.76 | DQA:1,3,4-TRIHYDROXY-5-OXO-CYCLOHEXANECARBOXYLIC ACID NA:SODIUM ION | |||
5yhm | [A11B] | [A12] | [A12] | 1.91 | SO4:SULFATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
5yl5 | [A12] | [A12] | [A12] | 1.9 | GOL:GLYCEROL SO4:SULFATE ION TRS:2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | |||
5ypq | [A12] | [A12] | [A12] | 2.65 | GOL:GLYCEROL SO4:SULFATE ION | |||
6cv6 | [A3] | [A3] | [A3] | 2.6 | CL:CHLORIDE ION TAR:D(-)-TARTARIC ACID TLA:L(+)-TARTARIC ACID |
*Chain Formula of OLIGAMI.
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
[ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
( ) : Nucleic acid - (AB) : DNA, (ab) : RNA